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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Histone deacetylase 5

UniprotKB/SwissProt ID: Q8RX28 (Q8RX28)

Gene Name: HDA5

Organism: Arabidopsis thaliana (Mouse-ear cress)

Function: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (Probable). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (Probable). Histone deacetylases act via the formation of large multiprotein complexes (PubMed:25922987). Involved in the regulation of flowering time by repressing FLC and AGL27/MAF1 expression (PubMed:25922987). Forms a histone deacetylase complex with HDA6, FLD and MSI4/FVE that represses FLC gene expression to control flowering time (PubMed:25922987). Unlike its tandem duplication HDA18, HDA5 does not seem to be required for the cellular patterning in the root epidermis (PubMed:16176989)

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus. Cytoplasm

Graphical Visualization of S-nitrosylation Sites:
InterPro ID Domain Name
IPR050284 HDAC_PDAC
IPR000286 His_deacetylse
IPR023801 His_deacetylse_dom
IPR037138 His_deacetylse_dom_sf
IPR023696 Ureohydrolase_dom_sf

The S-nitrosylation sites of Q8RX28

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site PubMed ID
1 49 DTPDGEDHPE C PDRIRVIWEK