\
logo
  Home | Contact us | Browse | Quick Search by UniProtKB ID, Keyword, PDBID

Menu:

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

Read more...


Protein Name: TP53-binding protein 1

UniprotKB/SwissProt ID: Q12888 (Q12888)

Gene Name: TP53BP1

Organism: Homo sapiens (Human)

Function: Double-strand break (DSB) repair protein involved in response to DNA damage, telomere dynamics and class-switch recombination (CSR) during antibody genesis (PubMed:12364621, PubMed:17190600, PubMed:21144835, PubMed:22553214, PubMed:23333306, PubMed:27153538, PubMed:28241136, PubMed:31135337, PubMed:37696958). Plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs and specifically counteracting the function of the homologous recombination (HR) repair protein BRCA1 (PubMed:22553214, PubMed:23333306, PubMed:23727112, PubMed:27153538, PubMed:31135337). In response to DSBs, phosphorylation by ATM promotes interaction with RIF1 and dissociation from NUDT16L1/TIRR, leading to recruitment to DSBs sites (PubMed:28241136). Recruited to DSBs sites by recognizing and binding histone H2A monoubiquitinated at 'Lys-15' (H2AK15Ub) and histone H4 dimethylated at 'Lys-20' (H4K20me2), two histone marks that are present at DSBs sites (PubMed:17190600, PubMed:23760478, PubMed:27153538, PubMed:28241136). Required for immunoglobulin class-switch recombination (CSR) during antibody genesis, a process that involves the generation of DNA DSBs (PubMed:23345425). Participates in the repair and the orientation of the broken DNA ends during CSR (By similarity). In contrast, it is not required for classic NHEJ and V(D)J recombination (By similarity). Promotes NHEJ of dysfunctional telomeres via interaction with PAXIP1 (PubMed:23727112)

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus. Chromosome. Chromosome, centromere, kinetochore

Graphical Visualization of S-nitrosylation Sites:
InterPro ID Domain Name
IPR015125 53-BP1_Tudor
IPR001357 BRCT_dom
IPR036420 BRCT_dom_sf
IPR047249 BRCT_p53bp1-like_rpt1
IPR047250 BRCT_p53bp1-like_rpt2
IPR014722 Rib_uL2_dom2
IPR047252 TP53BP1-like

The S-nitrosylation sites of Q12888

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site PubMed ID
1 101 DPVDSSNLDT C GSISQVIEQL   
2 1178 SAATQTIKNV C EQGTSTVDQN   
3 1375 KGVSQTGTPV C EEDGDAGLGI   
4 1525 YKLLFDDGYE C DVLGKDILLC   
5 1535 CDVLGKDILL C DPIPLDTEVT   
6 1703 AVGAGEFVSP C ESGDNTGEPS   
7 1926 VFDVVVTDPS C PASVLKCAEA   
8 1950 PVVSQEWVIQ C LIVGERIGFK   
9 319 QSNKTVSSDG C STPSREEGGC   
10 329 CSTPSREEGG C SLASTPATTL   
11 489 DMHSSSLTVE C SKTSEIEPKN   
12 513 DLGLSLTGDS C KLMLSTSEYS   
13 604 RDDISILATG C KGREETVAED   
14 772 KEPSPRVDVS C EPLEGVEKCS   
15 781 SCEPLEGVEK C SDSQSWEDIA   
16 797 WEDIAPEIEP C AENRLDTKEE   
17 986 GAAPDVDDKL C LRMKLVSPET