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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Probable ATP-dependent RNA helicase DDX6

UniprotKB/SwissProt ID: P26196 (P26196)

Gene Name: DDX6

Organism: Homo sapiens (Human)

Function: Essential for the formation of P-bodies, cytosolic membrane-less ribonucleoprotein granules involved in RNA metabolism through the coordinated storage of mRNAs encoding regulatory functions (PubMed:25995375, PubMed:27342281, PubMed:31422817). Plays a role in P-bodies to coordinate the storage of translationally inactive mRNAs in the cytoplasm and prevent their degradation (PubMed:27342281). In the process of mRNA degradation, plays a role in mRNA decapping (PubMed:16364915). Blocks autophagy in nutrient-rich conditions by repressing the expression of ATG-related genes through degradation of their transcripts (PubMed:26098573)

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Cytoplasm, P-body. Cytoplasm. Nucleus. Cytoplasm, Cytoplasmic ribonucleoprotein granule

Graphical Visualization of S-nitrosylation Sites:
InterPro ID Domain Name
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C-like
IPR027417 P-loop_NTPase
IPR000629 RNA-helicase_DEAD-box_CS
IPR014014 RNA_helicase_DEAD_Q_motif

The S-nitrosylation sites of P26196

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site PubMed ID
1 102 STKGNEFEDY C LKRELLMGIF  CCCCCCCCCE E EEEECCCCCC  5.82%
2 324 AYVTERQKVH C LNTLFSRLQI  CCCCCCCCCE E EEEECCCCCC  3.34% 19483679
3 341 RLQINQSIIF C NSSQRVELLA  CCCCCCCCCE E EEEECCCCCC  3.21%
4 390 FRNGLCRNLV C TDLFTRGIDI  CCCCCCCCCE E EEEECCCCCC  2.49%